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Intron Name: Anas_platyrhynchos_platyrhynchos_23_2169087_2178435_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

2169087 - 2178435

Intron Length:

9349

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGCTC

5'SS Class:

strong_major

3'SS Sequence:

TGCAAATGTCTAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTGCAA

U12 Branch Point Sequence:

CCTTTTGCAAAT

Flanking Amino Acid:

GNPRDMRRFQVVLSTTVNVD

Intron Amino Acid Position:

212

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.5

0.93

0.9

76.9

38.6

Major BPS

65.8

0.39

1.4

77.7

37.1

Major PPT

0.16

1.1

47.3

44.7

Minor 5ss

35.3

-1.7

3.4

50.1

46.5

Minor BPS

-0.4

2.2

60.04

44.1

Associated Gene:

Gene:

EBF2

Ensembl Gene ID:

ENSAPLG00000009260

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009678

2068972 - 2203442

134471

ENSAPLT00000036458

2068972 - 2194724

125753

ENSAPLT00000033630

2068972 - 2203356

134385