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Intron Name: Anas_platyrhynchos_platyrhynchos_23_2180462_2181040_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2180462 - 2181040

Intron Length:

579

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGTAGA

5'SS Class:

strong_major

3'SS Sequence:

TGTTATTTCCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTTAT

U12 Branch Point Sequence:

CATACCATAATT

Flanking Amino Acid:

VFGTMLVWSELITPHAIRVQ

Intron Amino Acid Position:

295

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.4

0.86

0.9

38.6

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

0.7

0.9

73.1

41.8

Minor 5ss

33.7

-1.9

42.3

44.5

Minor BPS

60.4

0.4

1.7

75.1

41.4

Associated Gene:

Gene:

EBF2

Ensembl Gene ID:

ENSAPLG00000009260

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033630

2068972 - 2203356

134385

ENSAPLT00000009678

2068972 - 2203442

134471

ENSAPLT00000036458

2068972 - 2194724

125753