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Intron Name: Anas_platyrhynchos_platyrhynchos_23_2181168_2189860_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2181168 - 2189860

Intron Length:

8693

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTGAC

5'SS Class:

strong_major

3'SS Sequence:

GTTCTCCTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATCAC

U12 Branch Point Sequence:

TATCACATAATG

Flanking Amino Acid:

KGAPGRFIYTALNEPTIDYG

Intron Amino Acid Position:

337

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.9

0.85

0.9

75.8

34.3

Major BPS

78.3

0.7

32.1

Major PPT

84.5

0.78

0.8

81.3

30.7

Minor 5ss

31.6

-2.1

3.4

42.4

45.1

Minor BPS

49.9

-0.1

1.9

60.64

40.6

Associated Gene:

Gene:

EBF2

Ensembl Gene ID:

ENSAPLG00000009260

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036458

2068972 - 2194724

125753

ENSAPLT00000033630

2068972 - 2203356

134385

ENSAPLT00000009678

2068972 - 2203442

134471