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Intron Name: Anas_platyrhynchos_platyrhynchos_23_220427_220741_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

220427 - 220741

Intron Length:

315

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGAGC

5'SS Class:

strong_major

3'SS Sequence:

CTTCTTCTCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATATGAC

U12 Branch Point Sequence:

TTCTTCTCACAG

Flanking Amino Acid:

YHEQVSAKRKVVKMMIIVVC

Intron Amino Acid Position:

250

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.5

0.93

0.9

76.9

38.6

Major BPS

65.9

0.4

1.1

57.5

39.1

Major PPT

84.4

0.78

0.7

79.5

26.1

Minor 5ss

32.6

-2

3.1

44.2

Minor BPS

-0.3

56.14

45.3

Associated Gene:

Gene:

TACR1

Ensembl Gene ID:

ENSAPLG00000008032

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008345

201927 - 224748

22822

ENSAPLT00000020183

201927 - 221931

20005