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Intron Name: Anas_platyrhynchos_platyrhynchos_23_220939_221339_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

220939 - 221339

Intron Length:

401

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTTTG

5'SS Class:

strong_major

3'SS Sequence:

TCTGCCCTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTCAC

U12 Branch Point Sequence:

TCTTTCTCCATC

Flanking Amino Acid:

NPIIYCCLNDRFRVGFKHAF

Intron Amino Acid Position:

315

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.5

0.77

0.9

74.8

38.1

Major BPS

72.4

0.56

73.5

32.5

Major PPT

70.2

0.45

65.6

Minor 5ss

-1.5

3.2

48.2

47.9

Minor BPS

-0

65.51

Associated Gene:

Gene:

TACR1

Ensembl Gene ID:

ENSAPLG00000008032

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020183

201927 - 221931

20005

ENSAPLT00000008345

201927 - 224748

22822