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Intron Name: Anas_platyrhynchos_platyrhynchos_23_221479_224661_F

Intron Information:

Intron Rank:

Intron Class:

minor

Intron Phase:

Intron Coordinates:

221479 - 224661

Intron Length:

3183

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACC|GTATCCTTA

5'SS Class:

strong_minor

3'SS Sequence:

TGCAAAATAACAG|C

3'SS Class:

minor_BPS

U2 Branch Point Sequence:

CTCTGAA

U12 Branch Point Sequence:

TCTTTCCTGACT

Flanking Amino Acid:

MYKVSRIETTHLERITHQVC

Intron Amino Acid Position:

362

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

47.6

-0.1

1.4

49.8

43.6

Major BPS

69.8

0.49

37.5

Major PPT

56.1

0.14

1.1

48.3

42.6

Minor 5ss

88.1

1.28

1.1

85.5

31.8

Minor BPS

66.1

0.59

1.7

83.44

37.7

Associated Gene:

Gene:

TACR1

Ensembl Gene ID:

ENSAPLG00000008032

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008345

201927 - 224748

22822