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Intron Name: Anas_platyrhynchos_platyrhynchos_23_2292931_2293370_R


Intron Information:

Intron Rank:
10

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
2292931 - 2293370

Intron Length:
440

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TAG|GTGAAGTGG

5'SS Class:
major

3'SS Sequence:
TCTTCATATACAG|T

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TCTTCAT

U12 Branch Point Sequence:
TTTTTCTTCATA

Flanking Amino Acid:
GVAAESACCLVKESDKSYTM

Intron Amino Acid Position:
555

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
74
0.57
1
59.8
41.6

Major BPS
87.4
0.93
0.9
87.9
29.5

Major PPT
79
0.65
0.9
73.4
35.2

Minor 5ss
30
-2.3
3.3
37.8
47.1

Minor BPS
70.6
0.64
1.7
82.43
32.9

Associated Gene:

Gene:

Ensembl Gene ID:

Chromosome:
23

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

2288827 - 2299488
10662

2288827 - 2299420
10594