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Intron Name: Anas_platyrhynchos_platyrhynchos_23_2303448_2303944_F


Intron Information:

Intron Rank:
4

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
2303448 - 2303944

Intron Length:
497

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
ACG|GTAAAAATG

5'SS Class:
major

3'SS Sequence:
CTTTATTTTCTAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
CCTTTAT

U12 Branch Point Sequence:
ACTGCCTTTATT

Flanking Amino Acid:
NVGGRYFTTTRSTLVNKEPD

Intron Amino Acid Position:
104

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
73.9
0.56
1
69.2
41.5

Major BPS
71.5
0.54
1.1
63.3
42.8

Major PPT
84.2
0.77
0.8
77.1
36.8

Minor 5ss
36.9
-1.5
3.2
49.9
46.2

Minor BPS
59.8
0.39
1.8
73.77
43.4

Associated Gene:

Gene:
KCTD9

Ensembl Gene ID:

Chromosome:
23

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

2300753 - 2307828
7076