Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_23_2357869_2358903_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2357869 - 2358903

Intron Length:

1035

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAGGTCTT

5'SS Class:

major

3'SS Sequence:

TTGCCCTTGCTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

CTGTTTCTAATT

Flanking Amino Acid:

LICSTKLTQNVDLLGLLNWR

Intron Amino Acid Position:

632

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.5

0.69

74.5

41.9

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

67.7

0.4

62.1

39.8

Minor 5ss

38.9

-1.2

3.4

55.1

43.5

Minor BPS

55.5

0.25

1.7

71.27

40.8

Associated Gene:

Gene:

DOCK5

Ensembl Gene ID:

ENSAPLG00000010000

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021232

2326313 - 2380223

53911

ENSAPLT00000010625

2326280 - 2380223

53944

ENSAPLT00000024019

2326313 - 2380223

53911