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Intron Name: Anas_platyrhynchos_platyrhynchos_23_2365461_2366162_R


Intron Information:

Intron Rank:
8

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
2365461 - 2366162

Intron Length:
702

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
ACT|GTAAGTTAC

5'SS Class:
major

3'SS Sequence:
AAATGATTTCTAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTAAA

U12 Branch Point Sequence:
TTTATTTTAAAT

Flanking Amino Acid:
KLNNLQAVFTDLSSSDLIRP

Intron Amino Acid Position:
277

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
75.4
0.6
1.1
71.7
34.5

Major BPS
90.4
1
0.7
90.2
19.3

Major PPT
62.8
0.29
1
52.3
46.2

Minor 5ss
43.4
-0.7
2.8
62.5
42.2

Minor BPS
70.8
0.73
1.3
85.51
34.3

Associated Gene:

Gene:
DOCK5

Ensembl Gene ID:

Chromosome:
23

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

2326313 - 2380223
53911

2326313 - 2380223
53911

2354547 - 2380223
25677

2326280 - 2380223
53944