Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_23_2373715_2379575_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

2373715 - 2379575

Intron Length:

5861

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTTGCAGAT

5'SS Class:

weak_major

3'SS Sequence:

TCATATGCTCTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTCAT

U12 Branch Point Sequence:

TTTTGGTTGAAT

Flanking Amino Acid:

TVHILEMYEGSVIYLFTHSA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

56.5

0.15

1.4

58.1

41.2

Major BPS

84.8

0.86

1.1

85.7

34.9

Major PPT

67.4

0.39

58.6

42.5

Minor 5ss

32.6

-2

3.6

47.4

48.1

Minor BPS

2.5

80.13

Associated Gene:

Gene:

DOCK5

Ensembl Gene ID:

ENSAPLG00000010000

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021232

2326313 - 2380223

53911