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Intron Name: Anas_platyrhynchos_platyrhynchos_23_238173_239235_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

238173 - 239235

Intron Length:

1063

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGAGAA

5'SS Class:

strong_major

3'SS Sequence:

TTTCCTCTGTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAC

U12 Branch Point Sequence:

CTAACTGTAACA

Flanking Amino Acid:

QKDSELMNFKIAAGTLDASA

Intron Amino Acid Position:

132

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.1

0.87

0.8

76.5

26.8

Major BPS

84.6

0.86

0.8

83.9

22.3

Major PPT

80.7

0.69

0.9

Minor 5ss

24.3

-3

3.1

28.7

43.6

Minor BPS

50.7

0.02

2.1

64.5

42.1

Associated Gene:

Gene:

NCAPH

Ensembl Gene ID:

ENSAPLG00000008188

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022989

237332 - 246807

9476

ENSAPLT00000008534

237332 - 246807

9476