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Intron Name: Anas_platyrhynchos_platyrhynchos_23_245806_246272_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

245806 - 246272

Intron Length:

467

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

TTCGTTTTCACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTGAA

U12 Branch Point Sequence:

TTTTATTGAACT

Flanking Amino Acid:

TCLLHLANEKNLILEGTEDL

Intron Amino Acid Position:

689

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

97.9

1.13

0.6

92.3

16.1

Major BPS

79.4

0.73

0.9

69.6

37.5

Major PPT

83.7

0.76

0.8

79.1

32.9

Minor 5ss

-1.7

2.7

41.8

44.8

Minor BPS

0.74

1.6

90.08

33.4

Associated Gene:

Gene:

NCAPH

Ensembl Gene ID:

ENSAPLG00000008188

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022989

237332 - 246807

9476

ENSAPLT00000008534

237332 - 246807

9476