Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_23_2553888_2554182_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2553888 - 2554182

Intron Length:

295

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGT|GTAAGTACT

5'SS Class:

major

3'SS Sequence:

TCTTCTCTTACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTATAT

U12 Branch Point Sequence:

TCTTCTCTTACA

Flanking Amino Acid:

PQENKPQLRSPIIRPKGPPP

Intron Amino Acid Position:

748

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.4

0.62

1.1

77.4

37.4

Major BPS

64.1

0.35

1.2

45.5

Major PPT

89.2

0.88

0.6

83.8

24.5

Minor 5ss

40.4

-1.1

2.8

53.8

42.8

Minor BPS

55.8

0.17

71.87

40.1

Associated Gene:

Gene:

ADAM28

Ensembl Gene ID:

ENSAPLG00000013050

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013690

2553107 - 2573335

20229