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Intron Name: Anas_platyrhynchos_platyrhynchos_23_2556101_2556664_R


Intron Information:

Intron Rank:
17

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
2556101 - 2556664

Intron Length:
564

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GCT|GTAAGATAC

5'SS Class:
major

3'SS Sequence:
TGTGTTTCCCCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTCCAT

U12 Branch Point Sequence:
CCATCCTGAAGT

Flanking Amino Acid:
DCSAKCPGHAVCDHELQCQC

Intron Amino Acid Position:
638

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
70.4
0.48
1.1
65.4
35.1

Major BPS
77.3
0.68
1.2
86.7
32.3

Major PPT
77.6
0.62
0.9
69.5
41.6

Minor 5ss
41.1
-1
3.1
60.6
43.9

Minor BPS
55.8
0.26
1.8
69.42
47

Associated Gene:

Gene:
ADAM28

Ensembl Gene ID:

Chromosome:
23

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

2553107 - 2573335
20229