Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_23_2559069_2559497_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2559069 - 2559497

Intron Length:

429

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGACTC

5'SS Class:

strong_major

3'SS Sequence:

CCCCCCACTTCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATTAA

U12 Branch Point Sequence:

TTTCCCCCCACT

Flanking Amino Acid:

AHGECCENCQYKAAGTVCRA

Intron Amino Acid Position:

459

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

72.7

37.1

Major BPS

58.9

0.22

50.1

34.6

Major PPT

70.1

0.45

0.8

65.7

28.6

Minor 5ss

38.2

-1.3

3.3

52.2

38.6

Minor BPS

48.8

-0

2.3

78.94

42.7

Associated Gene:

Gene:

ADAM28

Ensembl Gene ID:

ENSAPLG00000013050

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013690

2553107 - 2573335

20229