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Intron Name: Anas_platyrhynchos_platyrhynchos_23_2612789_2633738_F

Intron Information:

Intron Rank:

Intron Class:

major_hybrid

Intron Phase:

Intron Coordinates:

2612789 - 2633738

Intron Length:

20950

Sequence Information:

Terminal Dinucleotides:

GT-TG

5'SS Sequence:

GAG|GTAATGTTA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTATTCTTTG|G

3'SS Class:

major_hybrid

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

CTTCCCATAACT

Flanking Amino Acid:

MVMHSLRGGAKLRKSAG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.75

77.6

Major BPS

96.5

1.15

0.6

34.2

Major PPT

46.3

-0.2

3.2

35.3

Minor 5ss

40.4

-1.1

3.3

55.8

48.3

Minor BPS

70.7

0.73

1.6

86.79

38.5

Associated Gene:

Gene:

STC1

Ensembl Gene ID:

ENSAPLG00000014693

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043602

2570555 - 2668446

97892

ENSAPLT00000015307

2489503 - 2668446

178944