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Intron Name: Anas_platyrhynchos_platyrhynchos_23_2633899_2638867_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2633899 - 2638867

Intron Length:

4969

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCAAC

5'SS Class:

strong_major

3'SS Sequence:

GGTGACATTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTGACAT

U12 Branch Point Sequence:

GTTCTGGTGACA

Flanking Amino Acid:

AAETPQTQIGRAMKQSHGQI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.3

0.86

0.9

77.5

32.9

Major BPS

49.9

-0

1.4

60.7

45.9

Major PPT

65.8

0.35

1.1

59.4

45.7

Minor 5ss

34.2

-1.8

2.9

42.1

Minor BPS

42.6

-0.5

2.5

59.89

40.1

Associated Gene:

Gene:

STC1

Ensembl Gene ID:

ENSAPLG00000014693

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043602

2570555 - 2668446

97892

ENSAPLT00000015307

2489503 - 2668446

178944