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Intron Name: Anas_platyrhynchos_platyrhynchos_23_2639024_2639748_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2639024 - 2639748

Intron Length:

725

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGGAT

5'SS Class:

strong_major

3'SS Sequence:

ATTTTTATTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTTTTATTATTT

Flanking Amino Acid:

ENPPEIECDDRNKNQARVAF

Intron Amino Acid Position:

113

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.97

0.8

82.1

Major BPS

100

1.24

0.5

100

Major PPT

87.1

0.83

0.8

81.5

34.2

Minor 5ss

30.9

-2.2

3.6

45.9

49.3

Minor BPS

62.5

0.47

1.8

84.55

36.3

Associated Gene:

Gene:

STC1

Ensembl Gene ID:

ENSAPLG00000014693

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015307

2489503 - 2668446

178944

ENSAPLT00000043602

2570555 - 2668446

97892