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Intron Name: Anas_platyrhynchos_platyrhynchos_23_2639892_2661800_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2639892 - 2661800

Intron Length:

21909

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

CCTCTCCCTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCGTAA

U12 Branch Point Sequence:

CCGTGCGTAACC

Flanking Amino Acid:

GSYGLVFPLSAEVVRCLNSA

Intron Amino Acid Position:

161

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.3

0.97

0.8

89.6

24.1

Major BPS

46.9

-0.1

1.4

43.4

41.5

Major PPT

79.5

0.66

0.7

73.1

25.1

Minor 5ss

46.3

-0.4

2.8

64.1

41.5

Minor BPS

46.3

-0.3

2.4

57.14

47.8

Associated Gene:

Gene:

STC1

Ensembl Gene ID:

ENSAPLG00000014693

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043602

2570555 - 2668446

97892

ENSAPLT00000015307

2489503 - 2668446

178944