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Intron Name: Anas_platyrhynchos_platyrhynchos_23_2661944_2662939_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2661944 - 2662939

Intron Length:

996

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGGGCG

5'SS Class:

major

3'SS Sequence:

CTCCTGTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATGAAA

U12 Branch Point Sequence:

TGCAGTTTAAGG

Flanking Amino Acid:

LYSAAKFDTQGKAFVKESLK

Intron Amino Acid Position:

209

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.1

0.66

1.1

62.3

41.3

Major BPS

57.6

0.19

1.3

67.9

36.3

Major PPT

80.5

0.69

0.8

71.8

38.1

Minor 5ss

28.5

-2.5

3.6

38.6

46.6

Minor BPS

44.7

-0.5

2.1

48.03

45.5

Associated Gene:

Gene:

STC1

Ensembl Gene ID:

ENSAPLG00000014693

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043602

2570555 - 2668446

97892

ENSAPLT00000015307

2489503 - 2668446

178944