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Intron Name: Anas_platyrhynchos_platyrhynchos_23_2666673_2668207_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2666673 - 2668207

Intron Length:

1535

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGGGT

5'SS Class:

strong_major

3'SS Sequence:

ATCTCTTCTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CATCCAT

U12 Branch Point Sequence:

TTTCCTCCCATC

Flanking Amino Acid:

KLKLYFRNLRASANRTAGPT

Intron Amino Acid Position:

352

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

0.9

38.2

Major BPS

57.2

0.18

1.3

68.1

Major PPT

82.7

0.74

0.8

77.3

30.7

Minor 5ss

25.5

-2.8

3.5

37.8

47.1

Minor BPS

43.2

-0.5

2.1

60.61

Associated Gene:

Gene:

STC1

Ensembl Gene ID:

ENSAPLG00000014693

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043602

2570555 - 2668446

97892

ENSAPLT00000015307

2489503 - 2668446

178944