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Intron Name: Anas_platyrhynchos_platyrhynchos_23_26921_28440_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26921 - 28440

Intron Length:

1520

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTGGT

5'SS Class:

strong_major

3'SS Sequence:

TTTCTCCTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGGTGAT

U12 Branch Point Sequence:

TTCTCCTTACAG

Flanking Amino Acid:

VIPEKKETVKREEEEEFARN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.5

0.84

0.9

35.3

Major BPS

66.1

0.4

1.3

57.1

49.4

Major PPT

89.8

0.9

0.6

84.3

23.7

Minor 5ss

36.1

-1.6

3.3

49.5

41.2

Minor BPS

62.1

0.24

1.8

68.4

44.9

Associated Gene:

Gene:

STAMBP

Ensembl Gene ID:

ENSAPLG00000005548

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017577

19098 - 34623

15526