About Basic Search Advanced Search Downloads
Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_23_2726332_2726853_F


Intron Information:

Intron Rank:
4

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
2726332 - 2726853

Intron Length:
522

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTACTGGAA

5'SS Class:
major

3'SS Sequence:
TCTGTTTTGCTAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
AATTTAT

U12 Branch Point Sequence:
AGTTGCTTCACT

Flanking Amino Acid:
RKPVVMKIKPGISEFANSPE

Intron Amino Acid Position:
138

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
70
0.47
1.1
62.3
38.1

Major BPS
79.9
0.74
0.9
69.7
37.1

Major PPT
73.8
0.54
1
69.2
41.8

Minor 5ss
27.5
-2.6
3.6
37.7
47

Minor BPS
57.5
0.32
2.2
79.07
42.9

Associated Gene:

Gene:
ENTPD4

Ensembl Gene ID:

Chromosome:
23

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

2724713 - 2733500
8788