About Basic Search Advanced Search Downloads
Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_23_2727005_2727090_F


Intron Information:

Intron Rank:
5

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
2727005 - 2727090

Intron Length:
86

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTTATTGGC

5'SS Class:
major

3'SS Sequence:
TGTAATTTTGCAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTTAA

U12 Branch Point Sequence:
CTATTTTTAACT

Flanking Amino Acid:
CTAGMRILPESQQKAILEDL

Intron Amino Acid Position:
188

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
71.6
0.51
1.2
64.5
40

Major BPS
87.3
0.93
0.8
78
36.5

Major PPT
79.8
0.67
0.9
73.3
41.5

Minor 5ss
29.5
-2.4
2.9
36.6
40.3

Minor BPS
76.1
0.9
1.1
83.9
37.2

Associated Gene:

Gene:
ENTPD4

Ensembl Gene ID:

Chromosome:
23

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

2724713 - 2733500
8788