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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_23_2737469_2737994_F

Intron Information:

Intron Rank:
124715
Intron Class:
major
Intron Phase:
Intron Coordinates:
2737469 - 2737994
Intron Length:
526

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
CTT|GTAAGCATC
5'SS Class:
major
3'SS Sequence:
TCATTTTTTCCAG|C
3'SS Class:
strong_PPT
U2 Branch Point Sequence:
ATTTCAT
U12 Branch Point Sequence:
CTTACCAAAAAT
Flanking Amino Acid:
Intron Amino Acid Position:

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
71.9
0.52
1.1
70.9
39.2
Major BPS
91.2
1.02
0.7
91.7
20.2
Major PPT
87.5
0.84
0.8
80.4
36.9
Minor 5ss
46.5
-0.4
2.9
67.1
37.9
Minor BPS
47.8
-0
2.1
71.06
45.2

Associated Gene:

Gene:
Ensembl Gene ID:
ENSAPLG00000017223
Chromosome:
23

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000044342
2736005 - 2739143
3139