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Intron Name: Anas_platyrhynchos_platyrhynchos_23_2746088_2749138_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

2746088 - 2749138

Intron Length:

3051

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACAATGG

5'SS Class:

major

3'SS Sequence:

CCTTTTGTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTCAA

U12 Branch Point Sequence:

CTTACTCAAACT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.47

1.1

56.9

43.1

Major BPS

77.9

0.69

0.8

77.9

25.8

Major PPT

85.6

0.8

83.6

31.4

Minor 5ss

35.6

-1.6

3.3

47.6

47.8

Minor BPS

49.2

0.02

72.98

Associated Gene:

Gene:

LOXL2

Ensembl Gene ID:

ENSAPLG00000006034

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019519

2745328 - 2781364

36037