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Intron Name: Anas_platyrhynchos_platyrhynchos_23_2749579_2751812_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2749579 - 2751812

Intron Length:

2234

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGTAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTCCCCTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTGAG

U12 Branch Point Sequence:

TGAGTCTCAGTT

Flanking Amino Acid:

LPSSKYGKGEGKIWMDNVHC

Intron Amino Acid Position:

121

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.8

0.96

0.8

28.7

Major BPS

67.4

0.43

1.5

65.3

43.7

Major PPT

88.3

0.86

0.6

Minor 5ss

-1.6

3.3

46.2

49.1

Minor BPS

-0.2

1.8

61.4

42.7

Associated Gene:

Gene:

LOXL2

Ensembl Gene ID:

ENSAPLG00000006034

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019519

2745328 - 2781364

36037

ENSAPLT00000006295

2741356 - 2781457

40102