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Intron Name: Anas_platyrhynchos_platyrhynchos_23_2751989_2762477_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2751989 - 2762477

Intron Length:

10489

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAATGTA

5'SS Class:

strong_major

3'SS Sequence:

TTTATGTTCACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTCTTGAATC

Flanking Amino Acid:

FDNSLLNQIENMNIQVEDIR

Intron Amino Acid Position:

180

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.9

83.9

27.1

Major BPS

96.5

1.15

0.6

34.2

Major PPT

81.5

0.71

0.9

75.9

37.9

Minor 5ss

35.6

-1.6

3.4

47.2

Minor BPS

75.7

0.79

1.3

83.09

Associated Gene:

Gene:

LOXL2

Ensembl Gene ID:

ENSAPLG00000006034

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019519

2745328 - 2781364

36037

ENSAPLT00000006295

2741356 - 2781457

40102