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Intron Name: Anas_platyrhynchos_platyrhynchos_23_2762690_2767619_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2762690 - 2767619

Intron Length:

4930

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGAGCT

5'SS Class:

strong_major

3'SS Sequence:

TTCTTCCTGCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTCAT

U12 Branch Point Sequence:

GGGTTCCAAACT

Flanking Amino Acid:

SERKYNAKVYKMFASRRKQH

Intron Amino Acid Position:

250

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

0.9

75.3

32.6

Major BPS

82.6

0.81

0.9

83.3

27.7

Major PPT

78.9

0.65

0.9

73.3

37.2

Minor 5ss

34.8

-1.7

3.5

49.1

Minor BPS

47.8

-0

65.76

44.5

Associated Gene:

Gene:

LOXL2

Ensembl Gene ID:

ENSAPLG00000006034

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019519

2745328 - 2781364

36037

ENSAPLT00000006295

2741356 - 2781457

40102