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Intron Name: Anas_platyrhynchos_platyrhynchos_23_2767843_2769234_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2767843 - 2769234

Intron Length:

1392

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCAAG

5'SS Class:

strong_major

3'SS Sequence:

CTGTGTCTTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGGTGAC

U12 Branch Point Sequence:

CAGTGGTGACCC

Flanking Amino Acid:

SGFRKAFRQEQPLVRLKGGA

Intron Amino Acid Position:

325

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.3

0.83

0.9

38.4

Major BPS

56.2

0.15

1.3

48.8

46.3

Major PPT

79.3

0.66

0.9

37.4

Minor 5ss

33.3

-1.9

2.8

38.7

46.6

Minor BPS

36.1

-1

2.4

43.59

44.1

Associated Gene:

Gene:

LOXL2

Ensembl Gene ID:

ENSAPLG00000006034

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019519

2745328 - 2781364

36037

ENSAPLT00000006295

2741356 - 2781457

40102