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Intron Name: Anas_platyrhynchos_platyrhynchos_23_2769419_2771867_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

2769419 - 2771867

Intron Length:

2449

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGGCA

5'SS Class:

strong_major

3'SS Sequence:

GCCCCTCCCAAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATAAGAC

U12 Branch Point Sequence:

CCCCTCCCAAAG

Flanking Amino Acid:

EAITGARLGQGMGPIHLNEI

Intron Amino Acid Position:

386

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.3

0.93

0.9

75.8

33.8

Major BPS

49.5

-0

1.1

46.8

36.1

Major PPT

56.1

0.14

54.9

28.2

Minor 5ss

29.5

-2.3

3.4

38.8

46.5

Minor BPS

38.1

-1

1.8

34.32

39.8

Associated Gene:

Gene:

LOXL2

Ensembl Gene ID:

ENSAPLG00000006034

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019519

2745328 - 2781364

36037

ENSAPLT00000006295

2741356 - 2781457

40102