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Intron Name: Anas_platyrhynchos_platyrhynchos_23_2772020_2772561_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2772020 - 2772561

Intron Length:

542

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGAAGC

5'SS Class:

strong_major

3'SS Sequence:

TTGTGTCCTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CATTTAT

U12 Branch Point Sequence:

CATTTATTGACT

Flanking Amino Acid:

NVPAMGFQNQLRLSGGRNPY

Intron Amino Acid Position:

437

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.6

0.86

0.8

35.2

Major BPS

76.3

0.65

67.3

39.3

Major PPT

0.67

0.9

36.8

Minor 5ss

28.4

-2.5

2.8

34.6

41.3

Minor BPS

61.8

0.45

1.6

76.69

39.8

Associated Gene:

Gene:

LOXL2

Ensembl Gene ID:

ENSAPLG00000006034

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019519

2745328 - 2781364

36037

ENSAPLT00000006295

2741356 - 2781457

40102