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Intron Name: Anas_platyrhynchos_platyrhynchos_23_2772730_2774718_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2772730 - 2774718

Intron Length:

1989

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTCCC

5'SS Class:

strong_major

3'SS Sequence:

TCTTTTTACCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAC

U12 Branch Point Sequence:

GTCTTTTTACCA

Flanking Amino Acid:

GLGFASHAFQETWYWHGDVS

Intron Amino Acid Position:

493

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

70.6

37.9

Major BPS

86.6

0.91

0.8

77.7

36.7

Major PPT

71.2

0.48

1.1

71.6

37.6

Minor 5ss

34.1

-1.8

3.1

44.9

43.1

Minor BPS

58.8

0.27

1.6

66.82

40.3

Associated Gene:

Gene:

LOXL2

Ensembl Gene ID:

ENSAPLG00000006034

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019519

2745328 - 2781364

36037

ENSAPLT00000006295

2741356 - 2781457

40102