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Intron Name: Anas_platyrhynchos_platyrhynchos_23_2774885_2775088_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2774885 - 2775088

Intron Length:

204

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTGAGTAAT

5'SS Class:

major

3'SS Sequence:

TCCCTCCTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCAAAT

U12 Branch Point Sequence:

GTGAGTTCAAAT

Flanking Amino Acid:

RFGAGVSCSETAPDLVLNAE

Intron Amino Acid Position:

548

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.7

0.58

76.8

33.7

Major BPS

77.3

0.68

81.5

Major PPT

81.3

0.7

72.6

32.2

Minor 5ss

33.2

-1.9

2.8

38.8

40.3

Minor BPS

43.6

-0.4

58.96

43.9

Associated Gene:

Gene:

LOXL2

Ensembl Gene ID:

ENSAPLG00000006034

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019519

2745328 - 2781364

36037

ENSAPLT00000006295

2741356 - 2781457

40102