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Intron Name: Anas_platyrhynchos_platyrhynchos_23_2775333_2778135_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2775333 - 2778135

Intron Length:

2803

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

CTGTGTCTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAACGAT

U12 Branch Point Sequence:

CTCGCCCTAACG

Flanking Amino Acid:

RHAWVWHDCHRHYHSMEVFT

Intron Amino Acid Position:

629

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

0.9

75.3

34.6

Major BPS

54.2

0.11

1.3

52.8

42.7

Major PPT

79.3

0.66

0.9

37.4

Minor 5ss

30.4

-2.2

3.2

42.4

44.3

Minor BPS

-0

1.9

59.61

47.9

Associated Gene:

Gene:

LOXL2

Ensembl Gene ID:

ENSAPLG00000006034

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019519

2745328 - 2781364

36037

ENSAPLT00000006295

2741356 - 2781457

40102