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Intron Name: Anas_platyrhynchos_platyrhynchos_23_2778252_2778756_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2778252 - 2778756

Intron Length:

505

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGTGTTTG

5'SS Class:

strong_major

3'SS Sequence:

TCTCCTCCTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAC

U12 Branch Point Sequence:

GTGGTTTTAACT

Flanking Amino Acid:

FCLEDTECEADVQKQYECAN

Intron Amino Acid Position:

668

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.3

0.81

0.9

76.6

Major BPS

89.7

0.98

0.7

89.9

Major PPT

79.6

0.67

0.7

77.7

24.2

Minor 5ss

44.5

-0.6

2.7

57.3

47.4

Minor BPS

65.7

0.57

1.4

75.57

41.7

Associated Gene:

Gene:

LOXL2

Ensembl Gene ID:

ENSAPLG00000006034

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006295

2741356 - 2781457

40102

ENSAPLT00000019519

2745328 - 2781364

36037