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Intron Name: Anas_platyrhynchos_platyrhynchos_23_2779738_2781162_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2779738 - 2781162

Intron Length:

1425

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTGAGAGGA

5'SS Class:

strong_major

3'SS Sequence:

GTCACCCCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTCAC

U12 Branch Point Sequence:

TCCTGCTTCACC

Flanking Amino Acid:

QRIWMYNCHIGGSFSDETEQ

Intron Amino Acid Position:

751

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.5

0.84

0.8

71.2

34.5

Major BPS

74.9

0.62

1.1

77.4

37.4

Major PPT

65.1

0.34

0.9

54.6

36.4

Minor 5ss

24.3

-3

3.1

29.7

43.1

Minor BPS

51.9

0.04

2.2

65.58

46.5

Associated Gene:

Gene:

LOXL2

Ensembl Gene ID:

ENSAPLG00000006034

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019519

2745328 - 2781364

36037

ENSAPLT00000006295

2741356 - 2781457

40102