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Intron Name: Anas_platyrhynchos_platyrhynchos_23_2847100_2849529_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

5UTR

Intron Coordinates:

2847100 - 2849529

Intron Length:

2430

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTTGTGGCC

5'SS Class:

weak_major

3'SS Sequence:

TCGGTCCCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GACTGAT

U12 Branch Point Sequence:

TGGGACTGATCC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

56.2

0.15

1.3

53.6

39.6

Major BPS

65.8

0.39

1.2

57.3

41.7

Major PPT

68.6

0.42

0.9

61.3

35.2

Minor 5ss

25.5

-2.8

3.4

41.7

Minor BPS

-0.4

1.9

53.05

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028005

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017652

2846484 - 2877518

31035