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Intron Name: Anas_platyrhynchos_platyrhynchos_23_2973273_2974558_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2973273 - 2974558

Intron Length:

1286

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCGGG

5'SS Class:

strong_major

3'SS Sequence:

CTCCCCGTGCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTCAC

U12 Branch Point Sequence:

GCTCTCACAACC

Flanking Amino Acid:

ELPPRPSLPQEPRSHHNSSP

Intron Amino Acid Position:

286

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

0.9

63.1

43.4

Major BPS

72.7

0.56

30.1

Major PPT

64.2

0.32

56.8

38.7

Minor 5ss

30.3

-2.3

3.3

37.8

47.1

Minor BPS

47.1

-0.2

1.8

57.77

40.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027885

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026570

2971238 - 2976475

5238