Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_23_2974617_2974689_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2974617 - 2974689

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAAGGCTG

5'SS Class:

major

3'SS Sequence:

GCTCTCCCCACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTGAT

U12 Branch Point Sequence:

CCCCCCCTGATG

Flanking Amino Acid:

GRGELGLGGHGSQSLPSAPE

Intron Amino Acid Position:

266

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.8

0.68

1.1

64.3

47.1

Major BPS

66.4

0.41

1.1

56.9

40.5

Major PPT

72.1

0.5

0.8

64.9

30.8

Minor 5ss

33.9

-1.8

3.4

39.3

Minor BPS

45.6

-0.4

1.7

44.19

42.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027885

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040461

2972035 - 2976475

4441

ENSAPLT00000026570

2971238 - 2976475

5238