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Intron Name: Anas_platyrhynchos_platyrhynchos_23_2974818_2974902_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2974818 - 2974902

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGACCC

5'SS Class:

strong_major

3'SS Sequence:

CTTCCCTCTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTCCAG

U12 Branch Point Sequence:

CTGCCAACATCT

Flanking Amino Acid:

SPDRLATRFQDTMRMREEGS

Intron Amino Acid Position:

224

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.82

0.9

68.6

36.5

Major BPS

53.4

0.08

1.7

72.5

43.5

Major PPT

81.9

0.72

0.7

73.2

31.7

Minor 5ss

27.8

-2.5

2.9

34.2

41.4

Minor BPS

38.7

-0.7

2.1

56.11

45.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027885

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040461

2972035 - 2976475

4441

ENSAPLT00000026570

2971238 - 2976475

5238