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Intron Name: Anas_platyrhynchos_platyrhynchos_23_2978995_2979065_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

2978995 - 2979065

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCC|GTAAGTAGG

5'SS Class:

major

3'SS Sequence:

CGGCACCCCACAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CCCTCAC

U12 Branch Point Sequence:

GCCCCCTCACCA

Flanking Amino Acid:

LQRLRNPMDPVPGSLPVPTP

Intron Amino Acid Position:

568

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.8

0.44

1.4

47.6

Major BPS

60.1

0.25

1.1

62.9

34.3

Major PPT

58.9

0.2

0.9

49.8

33.9

Minor 5ss

-1.5

2.7

47.1

41.6

Minor BPS

46.9

-0.2

1.9

53.68

44.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026511

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045732

2978434 - 2981878

3445