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Intron Name: Anas_platyrhynchos_platyrhynchos_23_2980511_2980595_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2980511 - 2980595

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCCTG

5'SS Class:

strong_major

3'SS Sequence:

CCCCATCCCATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCCAC

U12 Branch Point Sequence:

GTGTCCCCATCC

Flanking Amino Acid:

VGIFPSNYVEVLPPTEVPKP

Intron Amino Acid Position:

335

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.79

0.9

68.8

43.8

Major BPS

67.4

0.43

1.3

78.4

35.2

Major PPT

63.3

0.3

0.8

56.6

Minor 5ss

-1.6

3.2

46.7

48.6

Minor BPS

46.1

-0.3

2.1

60.47

44.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026511

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045732

2978434 - 2981878

3445