Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_23_2998995_3001183_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2998995 - 3001183

Intron Length:

2189

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGACAAAG

5'SS Class:

major

3'SS Sequence:

CCCTCCCTTGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTCAC

U12 Branch Point Sequence:

TTGTCACTACAC

Flanking Amino Acid:

YVDRGYFSIECVLYLWSLKI

Intron Amino Acid Position:

126

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.6

0.56

1.1

67.7

39.3

Major BPS

74.9

0.62

1.1

77.4

37.4

Major PPT

78.8

0.65

0.7

72.3

25.8

Minor 5ss

32.9

-1.9

2.9

39.4

46.1

Minor BPS

44.6

-0.4

2.2

61.72

43.1

Associated Gene:

Gene:

PPP3CC

Ensembl Gene ID:

ENSAPLG00000013030

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040416

2987768 - 3010500

22733

ENSAPLT00000038121

2987768 - 3010500

22733

ENSAPLT00000013618

2989772 - 3010500

20729