Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_23_3030543_3030676_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3030543 - 3030676

Intron Length:

134

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTAAGAGAA

5'SS Class:

major

3'SS Sequence:

CTCCCCGCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAG

U12 Branch Point Sequence:

GCGCACGGCACC

Flanking Amino Acid:

VIRSDSVLASMHAIYKQNAA

Intron Amino Acid Position:

353

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.4

0.69

73.4

30.6

Major BPS

67.4

0.43

1.5

65.3

43.7

Major PPT

67.4

0.39

0.8

60.8

29.2

Minor 5ss

32.2

-2

3.4

42.7

44.5

Minor BPS

33.6

-1.3

2.2

38.22

39.6

Associated Gene:

Gene:

PIWIL2

Ensembl Gene ID:

ENSAPLG00000014006

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019075

3024998 - 3032956

7959

ENSAPLT00000014617

3024998 - 3032956

7959