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Intron Name: Anas_platyrhynchos_platyrhynchos_23_3030791_3031207_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3030791 - 3031207

Intron Length:

417

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTGCT

5'SS Class:

strong_major

3'SS Sequence:

CCCCTGGGCGCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GTGTAAC

U12 Branch Point Sequence:

TGCTGCTTCCCC

Flanking Amino Acid:

PSQASMLQHYRLQVWPGYSV

Intron Amino Acid Position:

315

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

0.9

74.9

35.3

Major BPS

56.8

0.17

1.4

61.4

43.2

Major PPT

0.18

51.7

36.8

Minor 5ss

28.5

-2.5

3.4

40.8

45.6

Minor BPS

36.8

-1

3.7

58.41

46.7

Associated Gene:

Gene:

PIWIL2

Ensembl Gene ID:

ENSAPLG00000014006

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019075

3024998 - 3032956

7959

ENSAPLT00000014617

3024998 - 3032956

7959