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Intron Name: Anas_platyrhynchos_platyrhynchos_23_3031491_3031633_R


Intron Information:

Intron Rank:
5

Intron Class:
major-like

Intron Phase:
0

Intron Coordinates:
3031491 - 3031633

Intron Length:
143

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTATCATTC

5'SS Class:
weak_major

3'SS Sequence:
TCTCGCCCCGCAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CTCTAAG

U12 Branch Point Sequence:
CCCCCTCTAAGC

Flanking Amino Acid:
ILFLPILLPQPVSLKAQRRV

Intron Amino Acid Position:
247

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
71.1
0.5
1.2
68.6
37.4

Major BPS
58.2
0.2
1.5
67.3
37.8

Major PPT
72.4
0.5
0.8
65.6
30.3

Minor 5ss
64.5
0.49
2.3
76.7
38.8

Minor BPS
43.7
-0.4
1.9
47.61
42.4

Associated Gene:

Gene:
PIWIL2

Ensembl Gene ID:

Chromosome:
23

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

3024998 - 3032956
7959

3024998 - 3032956
7959