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Intron Name: Anas_platyrhynchos_platyrhynchos_23_3034025_3034221_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3034025 - 3034221

Intron Length:

197

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACTGGGG

5'SS Class:

major

3'SS Sequence:

CCCTCCCGGCAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CACCCAT

U12 Branch Point Sequence:

CCTCCCGGCAAG

Flanking Amino Acid:

TMGTPCSFLQELVSVGIGDS

Intron Amino Acid Position:

330

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.4

1.1

51.7

45.2

Major BPS

52.1

0.05

1.2

62.1

35.8

Major PPT

49.4

-0

1.1

47.8

34.5

Minor 5ss

27.6

-2.6

3.6

38.4

46.6

Minor BPS

35.2

-1.3

2.3

38.48

44.2

Associated Gene:

Gene:

POLR3D

Ensembl Gene ID:

ENSAPLG00000014393

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014999

3033902 - 3039556

5655