Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_23_3039794_3040079_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3039794 - 3040079

Intron Length:

286

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAACGTC

5'SS Class:

strong_major

3'SS Sequence:

ATGTCTCCTGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

TCTTCTAGAAGT

Flanking Amino Acid:

LLGLILLNEKYFSDLRNSIV

Intron Amino Acid Position:

1018

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

36.9

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

77.1

0.61

0.9

70.6

35.5

Minor 5ss

40.3

-1.1

3.5

58.3

46.6

Minor BPS

49.4

0.03

73.42

43.5

Associated Gene:

Gene:

XPO7

Ensembl Gene ID:

ENSAPLG00000012460

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013112

3039405 - 3072039

32635